| Name | Versions | Platforms | Availability |
| 3D-Dock, FTDock, RPScore and MultiDock
|
2.0 |
 |
All Structure workstations |
| ACE/gr
|
3.0.1pl8 |
|  |
All Structure IRIX workstations |
| Adxv
|
1.9.1 |
|  |
All Structure workstations |
| ARP/wARP
|
0.97 |
 |
All Structure Linux workstations |
| Bsoft
|
1.3.0 |
 |
All Structure Linux workstations |
| CCP4/CCP4i
|
6.0,5.0.2 |
|  |
All IRIX Structure workstations. Certain Linux workstations. |
| Chimera
|
1.2199 |
|  |
All Structure workstations |
| CNSsolve
|
1.1 |
|  |
All Structure workstations |
| Coot
|
0.1.1 |
 |
All Structure Linux workstations |
| CYANA
|
1.0 |
 |
All Structure workstations |
| DINO
|
0.9-rc9 |
 |
All Structure Linux workstations |
| EMAN
|
1.7, 1.61 |
|  |
Available on all Structure systems |
| EMFit
|
1.0 |
 |
All Rossmann Structure workstations |
| Glide, Liason, Maestro
|
7.0 |
 |
All Structure Linux workstations |
| Gnuplot
|
4.0 |
| | |  |
All Structure workstations |
| Grace
|
5.1.18 |
| | |  |
All Structure Linux workstations |
| GRAMM
|
1.03 |
|  |
All Structure workstations |
| HKL-2000
|
0.98.689 |
|  |
All Structure Workstations with valid license |
| IMOD
|
3.7.7 |
 |
All Structure Linux workstations |
| Open Inventor
|
2.1.5 |
|  |
All Structure Linux/IRIX workstations |
| Matlab
|
6.5, 7.04 |
 |
All Structure Linux workstations |
| Modeller
|
8v0 |
|  |
All Structure workstations |
| Molscript
|
2.1.2 |
|  |
All Rossmann Structure workstations |
| O
|
8, 9.06, 9.07, 10.03 |
| | |  |
Licensed per host |
| Phaser
|
1.3 |
 |
Some Structure workstations |
| Phenix
|
1.1a |
 |
All Structure workstations |
| PHYLIP
|
3.65 |
 |
All Structure Linux Workstations |
| Prosa II
|
3.0, 2003 |
|  |
All Structure IRIX workstations |
| PyMOL
|
1.0r2 |
|  |
All Structure Linux/IRIX workstations |
| Raster3D
|
2.7c |
 |
All Structure Linux workstations |
| Ribbons
|
3.21 |
 |
All Structure workstations |
| RobEM
|
2.00 |
 |
Some Structure workstations |
| saxs3d, xlattice, pdb2xyz_saxs
|
v041000, v990315, 1999 |
 |
All Structure Linux workstations |
| SHARP/autoSHARP
|
2.2.0 |
|  |
Licensed per host |
| SHELX
|
97 |
|  |
All Structure workstations |
| Situs
|
2.3 |
 |
All Rossmann Structure workstations |
| SOLVE/RESOLVE
|
2.09 |
 |
All Structure Linux workstations |
| SPIDER
|
UNIX 11.10 |
|  |
Rossmann Lab Linux Workstations |
| VMD
|
1.8.3 |
| | |  |
All Structure workstations |
| X-GEN
|
5.5.3 |
| |  |
All Structure workstations |
| XtalView
|
4.0 |
|  |
All Rossmann Structure workstations |
| XV
|
3.10a-27 |
|  |
All Structure workstations |